麻豆视频

PAY FOR CODING lessons https://www.codecademy.com/ https://www.datacamp.com/ FREE CODING lessons General Sequencing: Short read workshop: http://dna.colorado.edu/ShortRead/ Science-based: https://datacarpentry.org/lessons/ Python: Introduction to python by Microsoft- very good: https://www.youtube.com/watch?v=jFCNu1-Xdsw&list=PLlrxD0HtieHhS8VzuMCfQD4uJ9yne1mE6 Jacob Stanley (DnA lab) workshop on python: https://github.com/jtstanley/DS2_materials Python for biologists: https://www.pythonforbiologists.org/ Introduction to pandas: https://www.youtube.com/watch?v=vmEHCJofslg Dataset used: https://github.com/KeithGalli/pandas More pandas stuff: https://nikgrozev.com/2015/12/27/pandas-in-jupyter-quickstart-and-useful-snippets/ The...

This video demonstrates the use of R for people that have never coded before. I taught this class over Zoom for the Facebook group Ph.D. Mamas, because there was a large discussion about the best ways to learn R if you have never used R before. You can learn R...

I recently talked at the NIH (via zoom) about " Before, During, and After I Learned My PI Falsified Data". This website has a video of the talk if you'd like to learn more. This is an article that was written right after the misconduct situation. This is an article...

Never forget that if you are a graduate student at CU Boulder, you are an essential community member. As a member of the community, If you need resources, you should be able to get them. You are not alone! Do you need: Ideas for dealing with stress Take this online...

鈥淭alent is extremely important. It鈥檚 like a sports team, the team that has the best individual player will often win, but then there鈥檚 a multiplier from how those players work together and the strategy they employ.鈥� Elon Musk We are starting a new program at the University of Colorado -Boulder,...

Often the goal of a RNA-seq type experiment is to find differentially expressed genes. Below I give guidelines for calling differential expression. Idea behind differental expression programs Imagine you do RNA-seq on 6 samples that are all biological replicated of each other. When you analyze them, you split them into...

When I first got into bioinformatics one of the things I needed to learn quickly was how to graph with very large tabels of data. Below are some of my favorite websites for learning how to graph big data. A great webstie with instructions on using R https://datacarpentry.org/R-ecology-lesson/index.html (Links to...

Do authors of scientific publications have to share data? If you are funded by NIH or NSF the answer is yes. Additionally, most journals have a statement saying they will not publish a paper if the data is not made available. For instance, the journal Nature requires all data to...

Is Peer review a good idea? The New York times has just relised an article questioning peer review. Even the public is worried. Should we be?

What is this seq protocol? I've never heard of it! my three-letter seq definition Where can I learn more about sequencing or bioinformatics? RNA-seq tutorial R tutorial (If you are a biologist, the ecology lesson is just as helpful as the genomics lesson. Do both.) Short read sequencing anaysis by...