Published: Nov. 6, 2023

PAY FOR CODING lessons

FREE CODING lessons

General Sequencing:

Short read workshop:

Science-based:

Python:

Introduction to python by Microsoft- very good:

Jacob Stanley (DnA lab) workshop on python:

Python for biologists:

Introduction to pandas:

  • Dataset used:
  • More pandas stuff:

The original main plotting software for python: and

Another newer plotting software for python:

Jupyter notebook installs:

For Mac:

R:

Download RStudio:

  • You want to get RStudio Desktop- Free for whatever machine you have

There is an “Intro to R” day in the Short read workshop that should be very useful.

Introduction to R:

  • This is an introduction to the ins and outs of R syntax.

R for Data Science:

  • This discusses applying R to data science with tips on exploratory data analysis.

The Pirate’s Guide to R:

  • This is an excellent (and famous) comprehensive guide to R. I highly recommend this for learning as it starts at the basics and helps you build up skills for data analysis. It is also an easy read.

Beautiful Plotting Tips:

  • Cheat sheet for making beautiful, publication worthy plots in ggplot2!